CDS
| Accession Number | TCMCG006C55377 |
| gbkey | CDS |
| Protein Id | XP_013725129.1 |
| Location | complement(join(8554671..8554835,8554925..8555081,8555736..8555806,8555927..8556078,8556170..8556413,8556491..8556550,8556622..8556709,8556851..8556981,8557079..8557225,8557335..8557385,8557461..8557535,8557650..8557757,8557868..8557915,8558015..8558176,8558256..8558356,8558445..8558592,8558677..8558838,8558940..8559057,8559147..8559271,8559404..8559643,8559742..8559882,8560004..8560159,8560251..8560499,8560590..8560834,8560911..8561024,8561158..8561441,8561575..8561656,8561772..8561909,8562009..8562114,8562203..8562505,8562595..8562790,8562879..8563354,8563453..8563494)) |
| Gene | LOC106428773 |
| GeneID | 106428773 |
| Organism | Brassica napus |
Protein
| Length | 1694aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA293435 |
| db_source | XM_013869675.2 |
| Definition | uncharacterized protein LOC106428773 isoform X2 [Brassica napus] |
EGGNOG-MAPPER Annotation
| COG_category | A |
| Description | tRNA rRNA methyltransferase (SpoU) family protein |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko01000 [VIEW IN KEGG] ko03016 [VIEW IN KEGG] ko03036 [VIEW IN KEGG] |
| KEGG_ko |
ko:K15333
[VIEW IN KEGG] |
| EC |
2.1.1.34
[VIEW IN KEGG]
[VIEW IN INGREDIENT] |
| KEGG_Pathway | - |
| GOs | - |
Sequence
| CDS: ATGAAGATGGTTCGTGCTTATGACTTGGATATGCTTAATAAGATTATACAATCGTTCTTTGATGTTGTGGTCGAGACTAGCGCATTGGATATACTGAGAGTGAGTTTGGTGCCTTTTCTACTGAGATCAGTTGGGGTTTCGATGGGAATGCTTCAACATGAAGAATCGGATTTCATCAAATGGGGAGAGCTGTTGCTTGGTGGCTCTTTGAATATAAATGATAATGATGGAAACTACGTTGGCTCTTTGTCTGAGTCATTTCCGATTCCACTGTCGTGCCATCTTTTGAACCTGATTCTGAACGCTGCTTTTCAAAGTCACCAAGCGGATTCAAAGGTGGAGGATTTTGCAGCTGGTATGCTTTGGGATTTGTGTAATATTACTGAGAGGCTTTTGTCACAAAGTGTAGAGCATCGTTCGTGCGCTGTTAGGTTCCTCCTCCCTGCTGTTTTCAAGGGGTTCTCTTCTCAATCTTCTCTGAAGATCTCACTTCAAGGAAATGTGTACATACTTTCAAGGAATGGCTTCAAGAAAAGGATTTGGGAATGCTGCAAGAAGCTGTTCTCGGTTGGATCAATAGAGAGAAGGGATGCTTACAGTGTTCTCTCTTTGTGTCTTTCTTCTGATGGAGCCCTAAGTTATGTCTCAGAAAAAGACCCTGTCGATTTTGACTTTAGGTCTCAAGAGTTTTGGGAAGAAATCAAAAAAGGCTTGGTTTTTGATGAGAGCTTAGTAAGGAAGCAGTCATTGCATATACTGAAATCAGTTTTATCCATAAGCGAAGTGAGTAAGACGAGTTCTGAGAAGAAGCCAGAAGGGAACTCAGTTCATCGTGCTTTGACGAAAAAGGAGATGTGGGCAGAGAAGGAAGCCAAGTCACTTGGTGTGGGAGAATTATATGGCTCTGTTGAATCTGCTTTGACTAGTCAGCAGCAGCAGTGGCAAGCTTTTGTGCTCCTGTATGAGATGCTTGACGAGTACGGCACTCATCTCGTAGAAGCAGTGTGGAGTAACCAGATTGATTTATTAATCAAATCATCTTCCAGATATGATGAGGAAACTGAAATATTTAATTGGTTAGAGGTTCTTTGGAATCGAGGCTTTCGTCATGATAATCCTCTAGTCAGGTGCACGGTCATGGAATCTTTTATGGGGATTGAGTGGAGAAGATACAAAACATGTACACAATCGATGTCCCAAACTTTCGTTCTTGGGCCTTTCATAGAGGCTTTAAATGATTCTGTACACCACAAGGACTTCGGGCTGAAAGGAATCTATACCTCAAGAACAATTGAAGGTGGAGCTCAATATGTGTGCGCGTACACAAGTTGCCTCAACCCAAGGAATCGGATTGGATTTTTGATCAACTTGGCATCTCTTGCAAAGAAACAGTCTTTTGGTAGGGCTGGATTTATGGCTCTCGTACAGTGTATTGTGTCTACAGCATATGTGGTTGGAGGATACGGGAACAAGGAGATGGAGCATCTTGAAAATGGATTCTCTGGGACTCCTCTAGAACCTTCTAGTGAACATTTAAGCCAAGATGAGATGTCACATATACTGGATGTCTTGAAGTTTGTTGCAGAGAGCAGCAGGCAACATTTTAATCACAAATACCGTACTCGAGTTTGCCAAAAAGTGTTGGAAACTGCTGTTTCAGTGGTGAACCCTTGTGAAGTTCCTCTTGGAACACTATTGCAGTTTGTTTCAGCAATTCCTCGGGAGTTTACTGACCATAATGGTTCATTGCGGAAAACGATGCTAGAATGGCTCCAGGGGTGCAACAGAAACACTTCCGACAGTTTATGTACTGATGGCACTCGTCTTGTAGCGAGCCTTCACGAGTATCTGAAAGAATTTGTCAGTGATCATGTTGAGGGTTTTGATGATGAAGACTTGGAAGCATGGGAATCCCAAACAAAACGATGGGCAAGAGTATTTTTCCTCACAGTTAACGATGAAGAACATCTCGCCGATATCATAACGTTTGTGCAAAATAGCGGCGTTAGTTTTTTCCAAGAGAAGAACCATTTAGAACGAGCACCTGCGAAGTTGTTAATCTTTATTCTGAGTATGCTCTTAGAGCTCCAGAACATGCAAGATGGAGTCTCTGAGCTGAGTTCTTCGGTGAAAAGCAAGTCATGCATTGGCATTGTTGAGGAAAATGGCAAGCAGATTGTTGGCAGCGCTTCAGTTATTAATGAAAAGTTTGCTGCTGTTCTCTTATCGATACTGAAGCAGCTGGTTTCATTTGCTGATTCATCTTGCTCAATATTCTGGTCTCACACTACTGTGGAGAATGGTGTTCTGTCTGGTTCTATCATAGGAAAACTAGGGGGTCCAAGTCAACGCCGACTATCTGTTCCTACTACAACAGCTGTACTAGAAGCTGTAACATCGGTGAAAATTATTGGGTTGATCTCGTCATACTGTGGTCAAGTAACTAGTGGTGTTACTGAACTCAAATTAGCATTGGCTTTCTTTTGGAAGTTCGTCCAGCATACGCTATCATCTCAAAATTGTAATTCTGAGGCTGAAGCTGAGATCTATCTTGCAGCATTTGAAACGCTAGCTGCTGTACTGAATGCAGTTTTGTCCTTGTGCTCAGCTAGAGCTTTCAACCTTCTAGAAAACGATAATACATTATTAGCTACGGTGGATGGTGAATATTGGTTACAAGCTTCAGTTCCGGATTTCCTCCACAACATTAACCATCTTCTCACAGCAGGACTTCTGGCAAGAAGTAGAAGGGCTGTTCTGCTTAGCTGGAAGTGGCTTTGTGTGGAGTCTCTATTATCAGTCATGAATGTTCTTGATGCCAGACGTATTCCAGGAGATAGGACGTCTTTCTTCTCAGATGATACAGTCAAAAGCATACTTTATGATATTGTAGAGAGCCTTGAAAATGCTGGGGAGGGTTCTGCTTTGCCTATGCTGAAATCTGTCAGACTTGCTTTGGGGATACTTGCGTCTGAGAAATCATCTTTGGATGGTTTCTCGGGTGTGGATACTCAGACGATGTGGCAGCTGGTCAAATCATGTTGGATATTGCATATCAGCTGCAAGAAGAGAAGGGTCGCACCCATTGCTGCGTTATTGTCTTCGGTGTTGCATTCTTCTTTGTTTAGTAATAAAGACATGCACGTAGCTGAAGATGGAGATGGACCGCTGAAGTGGTTTGTTGAAAAAGTACTTGAGGAAGGTCAGAAAAGTCCACGCACAATTCGACTTGCGGCCTTGCACCTAACAGGACTGTGGCTCATGTACCCTAGGACGATCAAGTACTACATTAAAGAATTGAAGCTTCTGACTCTCTATGGTTCTGTTGCATTTGATGAGGATTTTGAAGCTGAGTTATCTGACAATAGTGATGCAAGAACTGAAGTATCGTTACTGGCAAAGAACCCAGACCCTGAACTGACAGAAGTTTTTATCAACACGGAGTTGTATGCACGTGTGTCAGTCGCTGGTCTGTTTCAGAAGCTGGCTGATTTGGCCAATATGGCCGAACCAGCATGTCAAAATCAAGATTACCAGGATGCTATTGTGGCTGGAAAGTTGTTTCTATTGGAGCTTCTTGATGCGGCGGTGCATGATAAAGACTTGGCAAAGGAGCTTTACAAGAAGTATAGTGCTATCCACAGACGGAAAATACGCGCTTGGCAGATGATATGCATTATGTCGCGATTTGTCAGCAATGACATTGTTGGCCAAGTCATGGACAGTGTGCACATTTGCTTATATAGAAATAACCTGCCTGCTGTTCGACAATACCTGGAAACATTTGCCATAAACATTTACCTGAAATTTCCACCATTGGTTAAAGAGCAGTTAGTTCCTATACTGCAAAATTATGACACTAAAGCTCAGCAAGCTCTCTCGTCTTATGTCTTCATTGCAGCCAATGTCATCCTTCATGCCGAAAAGATGGCTCAACAGACAAATTTGAGAGAACTTCTTCCACCAATAATTCCGTTATTAACTTCTCATCATCATAGCTTACGAGGTTTCACTCAGTTATTAGTGCATCGGGTACTCTTTAGACTGTTTCCCCCCTTGGAGTCCACATCCTCTCAGACAATACCGTTGGAGAAGCTCTCTTTTGAGAATTTGAAGTCTTACCTGGACAAGAATCCTGATTGTTCGAGATTGCGATCATCAATGGAAGGATATCTTGATGCCTATGATCCCACCACATCTGCCACTCCGGCTGGTGTTTTTGTCAATCGTGTTGAGGAGAGTGAATTTGAATGTGTTCCAACATGCCTCATGGATAACGTGATTTCTTTTCTGAATGATGTTAGGGAAGATCTTCGTGCTTCCATGGCAAAAGACATTGTTACCATTAAGAATGAAGGCTTCAAGATCGAAGAAGAGCCCAACCGTCGGTTGATGACTTCCACATCAGATGAAGAAAGGCTTTCTGAACCATCTTCGTTGGACTTCCAGAAGAAGATCACTCTGACTAAACATGAGAAGCAAGATGCTACTTCAACAACTTCTGTGCTGCAAAATGGAGAAACTTACAAGCGGCTCTTTGAAATGGAGAAAGAAGACGAGCTTGTGAGTCAGCTCTTACGATCTAGAAGCATGGAGGTGGAGAGGTTGAAATCTGGCCGACAGAGTTTGATCCTTGTGGCTTCATTGGTTGATCGTATTCCTAATCTTGCTGGATTAGCCCGGACATGCGAGATATTTAAAGCATCGGGTCTTGTCGTTGGAGATGCAAGCATAATACACGACAAACAGTTCCAACTAATCAGCGTGACTGCTGAGAAATGGGTTCCAATCGTCGAAGTCCCGGTGAACAGTTTGAAACTGTTCTTGGAGAAAAAGAAAAGAGAAGGCTTCTCAATCTTGGGACTGGAGCAGACAGCTAACAGTGTTTCTCTGGACAAATATAAGTTCCCAAAGAAGACTGTTTTGGTGCTGGGTCGGGAAAAGGAAGGCATACCTGTGGATATAATCCATGTACTGGACGCTTGTGTGGAGATCCCACAACTAGGAGTTGTTAGGTCCCTCAACGTCCACGTCAGCGGCGCCATTGCTCTCTGGGAATACACTCGCCAACAACGCATTCAATAG |
| Protein: MKMVRAYDLDMLNKIIQSFFDVVVETSALDILRVSLVPFLLRSVGVSMGMLQHEESDFIKWGELLLGGSLNINDNDGNYVGSLSESFPIPLSCHLLNLILNAAFQSHQADSKVEDFAAGMLWDLCNITERLLSQSVEHRSCAVRFLLPAVFKGFSSQSSLKISLQGNVYILSRNGFKKRIWECCKKLFSVGSIERRDAYSVLSLCLSSDGALSYVSEKDPVDFDFRSQEFWEEIKKGLVFDESLVRKQSLHILKSVLSISEVSKTSSEKKPEGNSVHRALTKKEMWAEKEAKSLGVGELYGSVESALTSQQQQWQAFVLLYEMLDEYGTHLVEAVWSNQIDLLIKSSSRYDEETEIFNWLEVLWNRGFRHDNPLVRCTVMESFMGIEWRRYKTCTQSMSQTFVLGPFIEALNDSVHHKDFGLKGIYTSRTIEGGAQYVCAYTSCLNPRNRIGFLINLASLAKKQSFGRAGFMALVQCIVSTAYVVGGYGNKEMEHLENGFSGTPLEPSSEHLSQDEMSHILDVLKFVAESSRQHFNHKYRTRVCQKVLETAVSVVNPCEVPLGTLLQFVSAIPREFTDHNGSLRKTMLEWLQGCNRNTSDSLCTDGTRLVASLHEYLKEFVSDHVEGFDDEDLEAWESQTKRWARVFFLTVNDEEHLADIITFVQNSGVSFFQEKNHLERAPAKLLIFILSMLLELQNMQDGVSELSSSVKSKSCIGIVEENGKQIVGSASVINEKFAAVLLSILKQLVSFADSSCSIFWSHTTVENGVLSGSIIGKLGGPSQRRLSVPTTTAVLEAVTSVKIIGLISSYCGQVTSGVTELKLALAFFWKFVQHTLSSQNCNSEAEAEIYLAAFETLAAVLNAVLSLCSARAFNLLENDNTLLATVDGEYWLQASVPDFLHNINHLLTAGLLARSRRAVLLSWKWLCVESLLSVMNVLDARRIPGDRTSFFSDDTVKSILYDIVESLENAGEGSALPMLKSVRLALGILASEKSSLDGFSGVDTQTMWQLVKSCWILHISCKKRRVAPIAALLSSVLHSSLFSNKDMHVAEDGDGPLKWFVEKVLEEGQKSPRTIRLAALHLTGLWLMYPRTIKYYIKELKLLTLYGSVAFDEDFEAELSDNSDARTEVSLLAKNPDPELTEVFINTELYARVSVAGLFQKLADLANMAEPACQNQDYQDAIVAGKLFLLELLDAAVHDKDLAKELYKKYSAIHRRKIRAWQMICIMSRFVSNDIVGQVMDSVHICLYRNNLPAVRQYLETFAINIYLKFPPLVKEQLVPILQNYDTKAQQALSSYVFIAANVILHAEKMAQQTNLRELLPPIIPLLTSHHHSLRGFTQLLVHRVLFRLFPPLESTSSQTIPLEKLSFENLKSYLDKNPDCSRLRSSMEGYLDAYDPTTSATPAGVFVNRVEESEFECVPTCLMDNVISFLNDVREDLRASMAKDIVTIKNEGFKIEEEPNRRLMTSTSDEERLSEPSSLDFQKKITLTKHEKQDATSTTSVLQNGETYKRLFEMEKEDELVSQLLRSRSMEVERLKSGRQSLILVASLVDRIPNLAGLARTCEIFKASGLVVGDASIIHDKQFQLISVTAEKWVPIVEVPVNSLKLFLEKKKREGFSILGLEQTANSVSLDKYKFPKKTVLVLGREKEGIPVDIIHVLDACVEIPQLGVVRSLNVHVSGAIALWEYTRQQRIQ |